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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs34715080 chr1:213038478 CT/C LQK1 chr1:213029947-213031480:- 0.78 7.9 1.86E-10 Box Plot
ACC rs34755386 chr8:71575841 GA/G XKR9 chr8:71581600-71702606:+ 0.65 6.66 1.71E-8 Box Plot
ACC rs34774275 chr14:74333716 C/T LIN52 chr14:74551499-74667938:+ 0.55 5.5 1.17E-6 Box Plot
ACC rs34776711 chr2:61685845 CAT/C C2orf74 chr2:61372203-61391964:+ 0.59 5.77 4.48E-7 Box Plot
ACC rs34792847 chr1:245199362 C/CT EFCAB2 chr1:245133007-245290466:+ 0.69 6.24 8.01E-8 Box Plot
ACC rs34810164 chr14:64399261 T/TA SYNE2 chr14:64319701-64693151:+ 1.03 5.3 2.41E-6 Box Plot
ACC rs34815427 chr7:97479096 G/A TECPR1 chr7:97843936-97881563:- 0.79 5.17 3.75E-6 Box Plot
ACC rs34832720 chr7:97462241 T/C TECPR1 chr7:97843936-97881563:- 0.7 5.28 2.53E-6 Box Plot
ACC rs34835781 chr17:62984609 G/A AMZ2P1 chr17:62962668-62971694:- 0.9 5.57 9.2E-7 Box Plot
ACC rs34856835 chr8:71970611 C/G XKR9 chr8:71581600-71702606:+ 0.61 5.46 1.34E-6 Box Plot
ACC rs34868679 chr2:99799633 A/AG TSGA10 chr2:99613724-99771427:- 0.57 5.58 8.74E-7 Box Plot
ACC rs34877235 chr7:64427146 C/CA INTS4L1 chr7:64601603-64694600:+ 0.71 5.22 3.18E-6 Box Plot
ACC rs34882924 chr8:71566308 T/C XKR9 chr8:71581600-71702606:+ 0.65 6.66 1.71E-8 Box Plot
ACC rs34897549 chr7:64516681 G/A INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs34905858 chr8:71659450 G/A XKR9 chr8:71581600-71702606:+ 0.71 6.74 1.29E-8 Box Plot